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gntK [2019-06-26 09:33:03]
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gntK [2019-06-26 09:33:03]

gluconokinase
locus
BSU40060
pI
5.52
mw
57.00 kDa
protein length
513 aa Sequence Blast
gene length
1542 bp Sequence Blast
function
gluconate utilization
product
gluconokinase
essential
no
ec
2.7.1.12
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.13|Utilization of gluconate]

    • Gene

    Coordinates
    4,114,141 4,115,682

    The protein

    Catalyzed reaction/ biological activity

  • ATP D-gluconate = ADP 6-phospho-D-gluconate (according to Swiss-Prot)

    • Protein family

  • FGGY kinase family (according to Swiss-Prot)

    • Structure

  • [PDB|3GBT] (from ''Lactobacillus acidophilus'', 39% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|1C566E54F8EF1A17A365FC49DFDA452AC5D0CA64|gntR]-[gene|72404FA6ECD62AEA3EFDB934DFB8DA581875605C|gntK]-[gene|C6810A4ACD51EB8D14E5B30163348058196266A1|gntP]-[gene|7E7187AA2DC172018A63A7B9CE48124F30311639|gntZ]
    description
    [pubmed|10746760,3020045]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|3020045], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|1C566E54F8EF1A17A365FC49DFDA452AC5D0CA64|GntR]: repression, [Pubmed|3020045], in [regulon|1C566E54F8EF1A17A365FC49DFDA452AC5D0CA64|GntR regulon]
  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, [Pubmed|10666464], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: activation, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • induced by gluconate ([protein|search|GntR]) [Pubmed|3020045]
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    Biological materials

    Mutant

  • BKE40060 ([gene|72404FA6ECD62AEA3EFDB934DFB8DA581875605C|gntK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCCGATATCGATTCCTAACA, downstream forward: _UP4_TAGTACATGACATGAAGGGG
  • BKK40060 ([gene|72404FA6ECD62AEA3EFDB934DFB8DA581875605C|gntK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCCGATATCGATTCCTAACA, downstream forward: _UP4_TAGTACATGACATGAAGGGG

    • References

  • 3011959,8288545,3037520,2537826,6322857,3020045,10746760,8370661,3020045,1659648,220817675